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Author: 历军

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本书由曙光牵头,参与单位有近20家,比较全面的反映了中国高性能计算应用的现状。主题内容涵盖高性能技术简介,高性能计算在材料研究,生物信息,大气海洋与气候研究,工业仿真,石油勘探与加工,渲染,遥感,以及深度学习方面的应用。同时我们邀请了中国超算创新联盟秘书长,中科院计算机网络信息中心副主任迟学斌研究员对未来的高性能计算技术和应用做了展望。

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# 【One-Line Pitch】 A comprehensive survey of high-performance computing (HPC) applications in China, covering everything from fundamental supercomputing concepts to real-world deployments across materials science, bioinformatics, climate modeling, engineering simulation, oil exploration, rendering, remote sensing, and deep learning — essential reading for researchers, HPC practitioners, and anyone wanting to understand how supercomputing drives scientific and industrial progress in China. --- # 【Book Arc】 - **Opening (~0%–10%)**: Introduces the significance of HPC as a national strategic technology, traces China's supercomputing development from the "863 Program" through milestones like Tianhe-2 and Sunway TaihuLight, and establishes the economic scale of the global supercomputing market (~$25B in 2015, projected $44B by 2020). - **Early (~10%–20%)**: Surveys foundational HPC applications across scientific domains — high-energy physics data processing, oil and gas exploration (BGP's 15,000-node cluster), numerical weather prediction history from 1955 through GRAPES, and engineering simulation's origins in aerospace. - **Early-to-Middle (~20%–40%)**: Dives deep into materials science and bioinformatics, explaining first-principles calculations for ferroelectric materials like BiFeO₃, Monte Carlo methods (classical and quantum), protein mass spectrometry, second-generation DNA sequencing technologies, and the emergence of precision medicine driven by genomics and big data. - **Middle (~40%–50%)**: Focuses on atmospheric, oceanic, and climate research — numerical weather prediction's evolution from ENIAC to modern WRF-Chem models, ocean circulation modeling, and air quality forecasting systems with detailed chemical mechanisms. - **Late (~50%–70%)**: Covers engineering simulation (CAE) in depth, including software categories, HPC infrastructure requirements (InfiniBand networks, parallel file systems, checkpoint/restart), and the shift from traditional design verification toward "simulation-driven design" as a competitive advantage. - **Ending (~70%–100%)**: Addresses oil exploration and processing, rendering, remote sensing big data, and deep learning applications — with the final chapter on deep learning connecting HPC to the AI revolution, followed by a forward-looking perspective from China Supercomputing Innovation Alliance. --- # 【Key Takeaways】 - **Supercomputing is a national strategic asset** (Opening): China's HPC development is explicitly tied to national security, economic growth, and scientific competitiveness — the book notes that high-speed rail and supercomputing are the only two areas where the US publicly acknowledges China's parity or superiority. - **HPC applications span virtually every scientific domain** (Opening): From nuclear test simulation and oil exploration to drug design, weather forecasting, and animation rendering — any problem requiring大规模 numerical simulation or big data analysis can benefit from supercomputing acceleration. - **Materials science relies on first-principles calculations** (Early): The book details density functional theory applications for ferroelectric and multiferroic materials, explaining how computational approaches reveal mechanisms (like Bi³⁺ lone pair electrons breaking inversion symmetry) that are impossible to observe experimentally. - **Monte Carlo methods are workhorses for physical simulation** (Early): Classical Monte Carlo handles Ising models where eigenstates factorize, while quantum Monte Carlo (specifically determinant QMC with BSS algorithm) becomes necessary when Hamiltonian terms don't commute — a crucial distinction for researchers entering computational physics. - **Bioinformatics and precision medicine are HPC growth areas** (Early-to-Middle): Second-generation sequencing platforms (454, Illumina/Solexa, SOLiD) generate massive datasets requiring supercomputing for assembly and analysis, while precision medicine integrates biobanks, bioinformatics, electronic health records, and big data analytics to enable personalized cancer treatment. - **Numerical weather prediction has a long, evolving history in China** (Middle): From the first operational short-range forecast system in 1969 to modern GRAPES and WRF-Chem models, weather forecasting remains a traditional yet demanding HPC application — doubling spatial resolution requires 16× more computing power. - **Engineering simulation is shifting from verification to design driver** (Late): The book emphasizes that competitive advantage comes not from purchasing CAE software but from building comprehensive simulation systems — including personnel skills, standards, data management, and knowledge accumulation — to enable "simulation-driven design" rather than post-hoc verification. - **Deep learning and HPC are inseparable** (Ending): Model training and inference both depend on supercomputing infrastructure, with the book projecting a $40B deep learning application market by 2020 and noting applications across speech, vision, autonomous vehicles, and defense. --- # 【Reading Tips】 - **Skim the opening chapters** (~0%–10%) for the big-picture context of China's HPC strategy and market — this is background material, not technical depth. - **Deep-read the materials science and bioinformatics chapters** (~20%–40%) if you're a computational researcher — they contain the most detailed methodological explanations, including specific algorithms (Monte Carlo importance sampling, DQMC) and software tools (LAMMPS, GRID for drug design). - **Use the application chapters as reference guides** (~40%–70%): Each domain chapter (weather, ocean, air quality, CAE, oil, rendering, remote sensing) follows a similar pattern — background, computational requirements, current status, and case studies — so you can jump directly to your field of interest. - **Pay attention to the case studies**: Real deployments (Beijing Olympics weather support, Shanghai Expo, BGP's oil exploration cluster, environmental monitoring stations) ground the technical discussion in practical reality and reveal actual system configurations and performance numbers. - **Watch for the hardware-software connection**: Throughout the book, note how specific HPC infrastructure choices (GPU vs. MIC nodes, InfiniBand networks, parallel file systems like ParaStor) map to application requirements — this is the practical knowledge that transfers to your own HPC planning. --- # 【Coverage Limits】 This guide covers the book's first half in detail (through engineering simulation), with lighter coverage of later chapters on oil exploration, rendering, remote sensing, and deep learning. The excerpts do not include the final chapter's full content on deep learning applications or the closing perspective on future HPC trends. --- #
Excerpt 1
……………………………… 263 第10章 高性能计算应用之深度学习研究 ……………………………………………… 265 10.1 深度学习技术简介……………………………………………………………… 265 10.1.1 深度学习的发展……………………………………………………… 265 10.1.2 深度学习应用分析...
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Excerpt 2
,其导师Lorentz用他的电子 理论做了解释,指出原子的散射现象是由具有极小质量的负电荷引起的.Thomson在卡文 迪什实验室也做出了类似的实验,认为电子是带负电荷的粒子,而且与Lorentz和Zeeman 得出的荷质比几乎相等.因为这项工作,Lorentz和 Zeeman获得1902年诺贝尔奖,  32 图...
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Excerpt 3
,可用它测序个人基因组———已经测序出 Watson的基因 组(7.4的覆盖率)和Neanderthal的DNA序列. Solexa:读长较短(35~50bp),但通量大,机器运行一次就可产生1.5Gb,用pairG ended库测序数据量可达3Gb.Solexa多数情况下用于测序小片段的核苷酸序列,如ChIPG...
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Excerpt 4
述污染物浓度的变化,后者则相对于固定 坐标系研究污染物的运动,以空间内固定的微元为研究对象;从模型研究对象来看,空气质 量模型又分为扩散模式、光化学氧化模式、酸沉降模式、气溶胶细粒子模式和综合性空气质 量模式. 4.4.2 空气质量预报的工作原理 空气质量模型一般考虑了以下大气过程:排放(人为和自然源排放)、输送...
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Excerpt 5
00转/分硬盘的理论IOPS为:IOPS=1000ms/(10.5ms+5.6ms)=1000/16.1= 62.1. 图6G11显示本地硬盘每秒写次数74,大于理论最大值62,因此,可以推断该结点的本 地硬盘已经出现了读写瓶颈,在只运行一个地震数据处理作业时,导致了计算结点性能的急 剧下降. 2)石油地震勘探数...
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Excerpt 6
花费数十分钟不等,有的复杂场景甚至达 到数小时,若使用单机渲染,所花费的时间将是一个天文数字,因此需要有足够数量的计算 结点组成集群,通过渲染管理软件将任务分发给所有计算结点,以分布式计算来提升渲染效 率,计算结点数量越多,任务总耗时越短. 如今渲染农场已经成为许多动画及特效公司的标准配置,实际上,离开了渲染农场...
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Excerpt 7
人开发了 MxNet深度学 习框架.MxNet相对Caffe来说,主要是设计理念较为先进.MxNet支持符号计算,支持 自动求导,支持多卡和多机运行.运行速度和Caffe相当,内存相对Caffe更节省一些. MxNet主要由C++编写,提供Python接口,依赖库比Caffe少,但是使用者比Caffe也少, 相应...
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Excerpt 8
量来解决高性能计算的资源、环境和应用问题. 正如北京航空航天大学的钱德沛教授分析的:“863计划”的指导思想有几个转变.第 一个转变是从1999年开始,从研究单台高性能计算机,向研究国家高性能计算环境的转变. 第二个转变是2006年,从强调单一性能指标的高性能计算机,到强调综合指标的高效能计 算机转变.国家重大项...
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Cloud NativeTechnology
Publish Year: 2018
Language: Chinese
Pages: 306
File Format: PDF
File Size: 13.2 MB
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